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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015813601.1_cds_XP_016497615.1_11728
CDS Infomation

[gene=LOC107816409] [db_xref=GeneID:107816409] [protein=laccase-4-like] [protein_id=XP_016497615.1] [location=complement(join(20238..20368,20704..21630,22034..22162,22255..22499,22938..23089,24079..24090))] [gbkey=CDS]
Sequence

ATGGAATCTTGGGTGATGGTGAAGAATACATCTCGCTTGTGTTCTACAAAGCCCATTGTC
ACTGTTAATGGCAAATTCCCAGGACCCACAGTCTATGCCAGGGAAGATGACACTGTGCTT
ATCAGGGTTGTTAACCATGTCAAATATAATGTCTCTATCCATTGGCATGGTGTGAGACAA
CTTAGAACAGGTTGGGCAGATGGACCAGCATATATCACACAATGTCCAATTCAGCCAGGT
CAAAGTTATTTGTACAACTTCACCATTACAGGTCAAAGGGGTACACTGTTTTGGCATGCT
CATATTCTGTGGCTAAGGTCAACTGTTCATGGCGCCATTGTCATTTTGCCTAAGCTTGGT
GTGCCATATCCATTTCCAAAACCTGACCATGAAGCTGTAGTTATTCTAGCTGAATGGTGG
AAATCTGATACTGAAGCTGTGATTAATCAGGCCATTAAGTCAGGTTTAGCCCCTAATGTT
TCTGATGCTCACACAATCAATGGTCATCCTGGACCCCTTTCAAACTGTCCATCCCAAGGT
GGATACAAATTGAGTGTTGATCCTGGAAAATCCTACATGTTGCGAGTTATCAATGCTGCA
CTCAATGAAGAACTCTTTTTCAAAATTGCTGGCCACAAAATGACTGTAGTTGAAGTAGAT
GCTACCTACGTAAAACCTTTCAAAACAGATACAATTGTGATTGCCCCTGGCCAAACCACA
AATGTAATTGTCGCAGCTAATCAAGGTTCTGGAAAATACATGGTTGTTGCTTCTCCATTC
ATGGACGCACCTATTGCAGTCGATAACGCGACTGCAACAGCCACGTTACATTATTCGGGC
ACGTTGGCTAGTTCAGTCACTACCCTAACAAACACTCCGCCCAAAAACGCGACCCCTGTG
GCTAACAATTTTGTAGACTCTCTTCGAAGCCTCAACTCGAAAAAATACCCTGCTAAAGTT
CCAAAAAATGTGGATCATTCGTTGTTTTTCACAGTAGGGTTAGGAATTAATCCATGTCCA
AGTTGCAAACAGGGTAATGGAAGCAGAGTTGTTGCTAGTATAAACAATGTCACATTTGTC
ATGCCAACTACAGCACTTTTACAAGCACATTTCTTTGGTATCAAAGGAGTTTATACAACA
GATTTTCCTCAAAATCCGCCATTTAAATTCAACTATACTGGAACACCACCAGCAAACTTG
TCAACGATGAGCGGGACGAAGGTTTATCGGTTGCCATATAATGCAATAGTTCAATTAGTT
TTGCAGGATACTGGAATTATATCCCCTGAAAATCATCCTATCCATTTGCATGGGTTTAAT
TTCTTTGCAGTAGGTAAAGGGCTAGGAAATTTTAATTCAAAAATAGATCCAAAGAATTTT
AATCTTGTTGATCCTGTTGAGAGGAATACAATTGGAGTACCAGCAGGAGGATGGGTAGCT
ATAAGATTCCGCGCTGACAATCCAGGAGTTTGGTTTATGCATTGTCATTTAGAGGTGCAT
ACAACATGGGGATTGAAGATGGCATTCCTAGTAGATAATGGCAAAGGTCCTAATGAGTCA
CTTTTGCCACCTCCAAAGGATCTACCAAAATGCTAA

Peptide Sequence

PEP ID

XP_016497615.1
PEP Infomation

PREDICTED: laccase-4-like [Nicotiana tabacum]
Sequence

MESWVMVKNTSRLCSTKPIVTVNGKFPGPTVYAREDDTVLIRVVNHVKYNVSIHWHGVRQ
LRTGWADGPAYITQCPIQPGQSYLYNFTITGQRGTLFWHAHILWLRSTVHGAIVILPKLG
VPYPFPKPDHEAVVILAEWWKSDTEAVINQAIKSGLAPNVSDAHTINGHPGPLSNCPSQG
GYKLSVDPGKSYMLRVINAALNEELFFKIAGHKMTVVEVDATYVKPFKTDTIVIAPGQTT
NVIVAANQGSGKYMVVASPFMDAPIAVDNATATATLHYSGTLASSVTTLTNTPPKNATPV
ANNFVDSLRSLNSKKYPAKVPKNVDHSLFFTVGLGINPCPSCKQGNGSRVVASINNVTFV
MPTTALLQAHFFGIKGVYTTDFPQNPPFKFNYTGTPPANLSTMSGTKVYRLPYNAIVQLV
LQDTGIISPENHPIHLHGFNFFAVGKGLGNFNSKIDPKNFNLVDPVERNTIGVPAGGWVA
IRFRADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNESLLPPPKDLPKC

Transcript Sequence

Gene sequence data has not been registered.